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Gramene Webinar Nov, 2016: Analysis and visualization of the plant gene Expression ATLAS data
Tuesday, November 15, 2016 11:00:00 AM PST - 11:30:00 AM PST
The Gramene database (http://www.gramene.org) is pleased to invite you to a FREE 30-min webinar focused on "Analysis and visualization of the plant gene Expression ATLAS data using Gramene's Genome Browser and Plant Reactome." 

The plant gene Expression Atlas (https://www.ebi.ac.uk/gxa/plant/experiments) was developed by our collaborators at EMBL-EBI. At present it contains transcriptomics data from 674 plant experiments from several plant species including both baseline as well as differential expression data. Users can access the baseline tissue-specific expression profiles of individual genes (data is fetched remotely) from Gramene's gene pages and the Plant Reactome. Users also have the option to upload and visualize the differential expression data on the Genome Browser and on plant pathways of their favorite species. 

Dr. Sushma Naithani, an Assistant Professor (Senior Research) at Oregon State University, will i) review the data sets available in the plant gene Expression ATLAS,  ii) demonstrate how users can access/view the baseline tissue-specific expression data in context of genes, Genome Browser and Plant Reactome pathways, and iii) demonstrate step by step how to visualize the differential expression data in Genome Browser and Plant Reactome.  

If you have a specific question or a case example that you would like us to address during this exercise, please contact us at webinar@gramene.org.

We are looking forward to hearing from you!

Join us online on Tuesday, Nov 15th, 2016 at 2:00 pm EST (11:00 am PST).


Sushma Naithani
Dr. Sushma Naithani
Oregon State University

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